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Miscellaneous Bioinformatics |
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Ed Buckler has developed a number of software tools for running a genomics lab and for analyzing genomics data that involves quantiative variation or diversity. Please be aware that no technical support is available for these software tools.
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Description
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Platform / Downloads
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| Robot Interface permits the graphical design of PCR, pooling, and sequencing using a TECAN robot. It contains a database useful for tracking all lab reactions. |
Java
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| CloneTracker is an Access database for tracking the sampling of diverse germplasm for multiple candidate genes. It provides report useful in troubleshooting PCR and sequencing. |
Windows
Download
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| QEX is Quantitative Analysis of Expression Profile data. Integrates RNA signature data with QTLs and genomic sequence. Only source code is provided, as you will need a programmer to make it work for you. |
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| SequencingFileHandler processes files from an automated sequencer and develops a file structure for contiging sequences from diverse lines. It also runs PHRED and PHRAP to contig the sequences. Only source code is provided, as you will need a programmer to make it work for you. |
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