gov.usda.gdpc.panzea
Class PanzeaGenotypeExperimentDatabaseMapping

java.lang.Object
  gov.usda.gdpc.database.AbstractDatabaseMapping
      gov.usda.gdpc.database.SimpleDatabaseMapping
          gov.usda.gdpc.panzea.PanzeaGenotypeExperimentDatabaseMapping

All Implemented Interfaces:

DatabaseMapping

public class PanzeaGenotypeExperimentDatabaseMapping

extends SimpleDatabaseMapping

Author:

terryc

Field Summary

static int	ALIGN_INDEX
static int	POLY_INDEX

Fields inherited from class gov.usda.gdpc.database.SimpleDatabaseMapping

myDBTable, myField

Fields inherited from class gov.usda.gdpc.database.AbstractDatabaseMapping

myProperty

Constructor Summary

PanzeaGenotypeExperimentDatabaseMapping(Property property, java.lang.String dbtable, java.lang.String field)
PanzeaGenotypeExperimentDatabaseMapping Constructor.

Method Summary

java.util.List	getJavaObjects(java.sql.ResultSet rs, ExtraInfo extraInfo) Gets the data from the given result set as Java objects.
java.lang.String	getSQLSubString(Filter filter, ExtraInfo extraInfo) Gets the SQL sub-string based on the given filter.
java.lang.String	toString() Returns the string representation of this database mapping.

Methods inherited from class gov.usda.gdpc.database.SimpleDatabaseMapping

equals, getDBTable, getDistinctSQL, getField

Methods inherited from class gov.usda.gdpc.database.AbstractDatabaseMapping

getProperty

Methods inherited from class java.lang.Object

clone, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

POLY_INDEX

public static final int POLY_INDEX

See Also:

Constant Field Values

ALIGN_INDEX

public static final int ALIGN_INDEX

See Also:

Constant Field Values

Constructor Detail

PanzeaGenotypeExperimentDatabaseMapping

public PanzeaGenotypeExperimentDatabaseMapping(Property property,
                                               java.lang.String dbtable,
                                               java.lang.String field)

PanzeaGenotypeExperimentDatabaseMapping Constructor. This is a specific simple database mapping that takes advantage of the where the data originated (polymorphism or alignment).

Parameters:

property - associated property. null is creating a mapping to use for matching against a property map.

dbtable - database table

field - database field from table

Method Detail

getJavaObjects

public java.util.List getJavaObjects(java.sql.ResultSet rs,
                                     ExtraInfo extraInfo)
                              throws java.sql.SQLException

Gets the data from the given result set as Java objects. The actual type of objects returned will match what's specified by the property associated with this mapping.

Specified by:

getJavaObjects in interface DatabaseMapping

Overrides:

getJavaObjects in class SimpleDatabaseMapping

Parameters:

rs - result set

extraInfo - this is extra information used by the database mapping to decide whether this is an alignment or a polymorphism.

Returns:

list of converted data

Throws:

java.sql.SQLException

getSQLSubString

public java.lang.String getSQLSubString(Filter filter,
                                        ExtraInfo extraInfo)

Gets the SQL sub-string based on the given filter.

Specified by:

getSQLSubString in interface DatabaseMapping

Overrides:

getSQLSubString in class SimpleDatabaseMapping

Parameters:

filter - filter

extraInfo - this is extra information used by the database mapping to decide whether this is an alignment or a polymorphism.

Returns:

SQL sub-string

toString

public java.lang.String toString()

Returns the string representation of this database mapping.

Overrides:

toString in class SimpleDatabaseMapping

Returns:

string representation