Uses of Interface
gov.usda.gdpc.LocusGroup

Packages that use LocusGroup

gov.usda.gdpc	This is the main package for The Genomic Diversity and Phenotype Connection (GDPC).
gov.usda.gdpc.axis	This package provides the code to allow GDPC to work with the SOAP Engine AXIS.
gov.usda.gdpc.panzea	This package provides a specific connection to the panzea database which is maintained by NCSU.

Uses of LocusGroup in gov.usda.gdpc

Classes in gov.usda.gdpc that implement LocusGroup

class	AbstractLocusGroup This class provides a skeletal implementation of the LocusGroup interface to minimize the effort required to implement this interface.
class	Chromosome
class	DefaultLocusGroup This is the default implementation of a locus group.

Methods in gov.usda.gdpc that return LocusGroup

LocusGroup	LocusGroup.getLocusGroup(LocusFilter filter) Get the locus group matching the given filter from this locus group.
LocusGroup	DBGateway.getLocusGroup(LocusFilter filter) Gets a locus group based on the given locus filter.
LocusGroup	DBConnection.getLocusGroup(LocusFilter filter) Gets a locus group based on the given locus filter.
LocusGroup	AbstractLocusGroup.getLocusGroup(LocusFilter filter) Get the locus group matching the given filter from this locus group.
LocusGroup	AbstractDBGateway.getLocusGroup(LocusFilter filter) Gets a locus group based on the given locus filter.
LocusGroup	AbstractDBConnection.getLocusGroup(LocusFilter filter) Gets a locus group based on the given locus filter.

Constructors in gov.usda.gdpc with parameters of type LocusGroup

DefaultLocusGroup(LocusGroup[] groups)
DefaultLocusGroup constructor.

Chromosome(int number, LocusGroup[] groups)
Chromosome constructor.

AbstractLocusGroup(LocusGroup[] groups)
AbstractLocusGroup constructor.

Uses of LocusGroup in gov.usda.gdpc.axis

Methods in gov.usda.gdpc.axis that return LocusGroup

LocusGroup

DBConnectionProxy.getLocusGroup(LocusFilter filter) Gets a locus group based on the given locus filter.

Uses of LocusGroup in gov.usda.gdpc.panzea

Fields in gov.usda.gdpc.panzea declared as LocusGroup

LocusGroup

PanzeaCache.LOCI

Methods in gov.usda.gdpc.panzea that return LocusGroup

LocusGroup

PanzeaDBConnection.getLocusGroup(LocusFilter filter) Gets a locus group based on the given locus filter.