gov.usda.gdpc
Class PhenotypeTable

java.lang.Object
  gov.usda.gdpc.AbstractTable
      gov.usda.gdpc.PhenotypeTable

All Implemented Interfaces:

Table

public class PhenotypeTable

extends AbstractTable

Author:

terryc

Method Summary

EnvironmentExperimentGroup	getEnvironmentExperimentGroup() Get the environment experiment group for this table.
static PhenotypeTable	getInstance(PhenotypeGroup group, PhenotypeOntology ontology) Factory method to create phenotype tables.
PhenotypeOntology	getPhenotypeOntology() Get phenotype ontology of this table.
TaxonGroup	getTaxonGroup() Get the taxon group for this table.

Methods inherited from class gov.usda.gdpc.AbstractTable

get, get, getColumn, getColumn, getColumnHeading, getColumnHeadings, getRow, getRow, getRowHeading, getRowHeadings, numColumns, numRows, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Method Detail

getInstance

public static PhenotypeTable getInstance(PhenotypeGroup group,
                                         PhenotypeOntology ontology)

Factory method to create phenotype tables. If the ontology parameter is null, this creates a phenotype table using the ontology of the first phenotype in the group.

Parameters:

group - phenotype group

ontology - phenotype ontology

Returns:

phenotype table

getEnvironmentExperimentGroup

public EnvironmentExperimentGroup getEnvironmentExperimentGroup()

Get the environment experiment group for this table.

Returns:

environment experiment group

getTaxonGroup

public TaxonGroup getTaxonGroup()

Get the taxon group for this table.

Returns:

taxon group

getPhenotypeOntology

public PhenotypeOntology getPhenotypeOntology()

Get phenotype ontology of this table.

Returns:

phenotype ontology